Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015936513.1_cds_XP_016482064.1_73327
CDS Infomation

[gene=LOC107802987] [db_xref=GeneID:107802987] [protein=phosphoglycerate kinase, cytosolic-like isoform X5] [protein_id=XP_016482064.1] [location=complement(join(11282..11515,12114..12212,12342..12426,13024..13073,13150..13226,14294..14369,15513..15580,15838..16129,16245..16588,16765..16954))] [gbkey=CDS]
Sequence

ATGGGAAAAGTTGTCATGGTCAGATTGGATTTGACCATCCTGCTAAGGGAGCAGAAGAAA
AAGCATTCGTCAGCAGCTCGTGTAATTTCAACCATCAAGTATCTACACAATGCTGGGGCA
AAATTAGTTCTAATAAGTAGCTGGAGTCCGAAAGCTGATTCACAGCTTCTGAAATTGGAA
CGTGTTGCAGAATTTCTATCGTCAGAACTTGAACTAAAAGTCATACCAGTGGAGCTTGGT
TCTGGACTTGAGCAGTCTCTGATGGAAGATGGACATAATTCTGACATCCTTCTGCTTGAG
AACCTTTCTCAGTTTAAGCAGGAGCAAGCCAATTGTTCAGAGTTTGCACGACGCCTATCA
TCTGGGGTCGATATCTTTGTTAATGATGCATTTTTCCAATCACATAAGATTCTTGCATCA
AATGTTGGTATTACCAGCTTCTGCTATTCCTCCATTGCCGGATTTCACTTTGACGAGGGA
ATGTCTCAACTGAAGAAGATAATCAAGATGAACAAATGGCCCTATTATGCAATAATTGGT
GGAGCTAATCTCGCTGGGAAAGCAGCAGCCTTGCAATTTTTGGCATCTAGATGTGATGGT
TTCATCTTTGTTGGAGATGCTGCATTTCAAATCATGCATGCTTTTGGATTACCTGTGCCT
ATGGAATTGGTGGAACAAGAATCACTAGAAGCAGCCGATATGCTACTTGAGGCTGCAAAG
GCAAGAGGAGTAAAAATTGTATTACCAAAAGACTTTTGGTGCGTCAATGATCATTATCCA
CTGCAGATGAAGACCTTTCCTGCTAATCATATCATGGATGGTAAAAGCTGGAAACCTGTT
GATGTTGGACCCAACACGTTGGAGGAAATGATTTCCGTGCTTTCAAGATGCAAGGCATAC
CCATTTGAGTTGAACTGGGATGCTATATATGCCAATACGACACTACCTCTTGTTGTTGAC
GTAGGAAGTGGCAACGGCTTATTTCTGTTCAGAATGGCAAAGATGAGGAAGGATTGGAAT
TTTCTTGGCATGGAAAATAATGAAAAGTTGGTGAGCCGTTGTCTTGATCATGTTTCTCAA
TCTGGCATGACAAATGGATACTTCATAGCGACAAATGCCACATCAACATTTCAGTCCATT
GTTTCCAGTTACCCTGGTGATCTGGTTCTTGTGTCAATACAGTGTCCAAATCCAGATTTC
AATAAAACAGAATACCGATGGAGGATGGTGCGAAGATCATTAGTTGAAGCAATAGCAGAC
TTACTGGCTTCTGATGGAAAGGTATTTCTCCAATCCGATGTAAAAGAAGTTGCAGTGAGA
ATGAAAGAAGAATTTATGAAATATGGTAAGGGTAAGCTCACAGTAGTGCATGATTTGGAA
GATAGCACCAGTCATCAAGATAGGTGGTTGAAGGAAAATCCCTTTGGCATTCGATCGGAT
TGGGAGCAACATGTTATAGACCGTGGAGCTCCTATGTACAGATTACTGCTATTGAAATCT
TCTCCTTCTGGTTGA

Peptide Sequence

PEP ID

XP_016482064.1
PEP Infomation

PREDICTED: phosphoglycerate kinase, cytosolic-like isoform X5 [Nicotiana tabacum]
Sequence

MGKVVMVRLDLTILLREQKKKHSSAARVISTIKYLHNAGAKLVLISSWSPKADSQLLKLE
RVAEFLSSELELKVIPVELGSGLEQSLMEDGHNSDILLLENLSQFKQEQANCSEFARRLS
SGVDIFVNDAFFQSHKILASNVGITSFCYSSIAGFHFDEGMSQLKKIIKMNKWPYYAIIG
GANLAGKAAALQFLASRCDGFIFVGDAAFQIMHAFGLPVPMELVEQESLEAADMLLEAAK
ARGVKIVLPKDFWCVNDHYPLQMKTFPANHIMDGKSWKPVDVGPNTLEEMISVLSRCKAY
PFELNWDAIYANTTLPLVVDVGSGNGLFLFRMAKMRKDWNFLGMENNEKLVSRCLDHVSQ
SGMTNGYFIATNATSTFQSIVSSYPGDLVLVSIQCPNPDFNKTEYRWRMVRRSLVEAIAD
LLASDGKVFLQSDVKEVAVRMKEEFMKYGKGKLTVVHDLEDSTSHQDRWLKENPFGIRSD
WEQHVIDRGAPMYRLLLLKSSPSG

Transcript Sequence

Gene sequence data has not been registered.